Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PCDHB17P-201ENST00000539533 2393 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 REXO1L8P-201ENST00000604378 1897 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 KRT8P35-201ENST00000483942 1338 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 SLED1-202ENST00000512051 380 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AC104982.3-201ENST00000581995 514 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 DRD5P1-201ENST00000456605 1438 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 AL121723.1-201ENST00000445194 1519 ntBASIC10.8□□□□□ -0.68
ALMS1Q8TCU4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 CYP46A4P-201ENST00000414953 267 ntBASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 RN7SL11P-201ENST00000471305 293 ntBASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 RN7SL574P-201ENST00000581512 297 ntBASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC10.79□□□□□ -0.68
ALMS1Q8TCU4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms