Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 SPDYE21P-201ENST00000413323 827 ntBASIC15.03■□□□□ -0
CNIH3Q8TBE1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 AC090616.6-201ENST00000582640 721 ntBASIC15.03■□□□□ -0
CNIH3Q8TBE1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.03■□□□□ -0
CNIH3Q8TBE1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.03■□□□□ -0
CNIH3Q8TBE1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AL590787.1-201ENST00000568856 1315 ntBASIC15.02■□□□□ -0
CNIH3Q8TBE1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 HOMER2P1-201ENST00000455653 964 ntBASIC15.02■□□□□ -0
CNIH3Q8TBE1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 MPDU1-223ENST00000582151 728 ntBASIC15.02■□□□□ -0
CNIH3Q8TBE1 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.02■□□□□ -0
CNIH3Q8TBE1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CNIH3Q8TBE1 AL590326.2-201ENST00000625139 305 ntBASIC15.02■□□□□ -0
CNIH3Q8TBE1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CNIH3Q8TBE1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 TP73-AS1-210ENST00000637775 1455 ntBASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 AC073508.3-201ENST00000619697 1419 ntBASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CNIH3Q8TBE1 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms