Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 IGHV3-71-201ENST00000523324 359 ntBASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 SPTSSB-204ENST00000617024 1292 ntBASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX2-3Q8TAU0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 U82695.1-201ENST00000635752 1889 ntBASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-3Q8TAU0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AC004890.2-204ENST00000481968 304 ntBASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 AC061975.2-201ENST00000581722 295 ntBASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 MIR6080-201ENST00000617359 66 ntBASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-3Q8TAU0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-3Q8TAU0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms