Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC061975.2-201ENST00000581722 295 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 AC138649.4-201ENST00000612222 287 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 ME2P1-201ENST00000426028 1970 ntBASIC17.57■□□□□ 0.4
BEST2Q8NFU1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 TREML5P-201ENST00000421694 576 ntBASIC17.57■□□□□ 0.4
BEST2Q8NFU1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST2Q8NFU1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 AL158211.3-201ENST00000607385 239 ntBASIC17.56■□□□□ 0.4
BEST2Q8NFU1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST2Q8NFU1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 FO538757.1-201ENST00000623083 1397 ntBASIC17.55■□□□□ 0.4
BEST2Q8NFU1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms