Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.37□□□□□ -0.11
CPEB3Q8NE35 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 AL671277.1-201ENST00000429656 993 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 HTR5BP-201ENST00000430851 1154 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 ALG1L5P-201ENST00000482043 771 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 RARRES2P8-201ENST00000566335 367 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.36□□□□□ -0.11
CPEB3Q8NE35 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPEB3Q8NE35 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AL355306.1-201ENST00000415580 579 ntBASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms