Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 FNTAP2-201ENST00000430308 634 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AL591846.1-201ENST00000451736 433 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 FTH1P14-201ENST00000482930 551 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AP001889.1-201ENST00000525414 633 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AC005702.4-201ENST00000618393 416 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 AP000974.1-201ENST00000623909 2387 ntBASIC13.57□□□□□ -0.24
CCDC168Q8NDH2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 AC016694.1-201ENST00000434179 700 ntBASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 RPL13AP25-201ENST00000484130 612 ntBASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC168Q8NDH2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC168Q8NDH2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms