Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC018845.2-201ENST00000568326 409 ntBASIC13□□□□□ -0.33
TTC9CQ8N5M4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 FAM197Y3-203ENST00000618346 717 ntBASIC13□□□□□ -0.33
TTC9CQ8N5M4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AL513523.2-202ENST00000427283 2040 ntBASIC13□□□□□ -0.33
TTC9CQ8N5M4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 KRT18P3-201ENST00000451602 1288 ntBASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 AC074386.1-202ENST00000463561 864 ntBASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms