Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC073439.1-201ENST00000624121 1774 ntBASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AC254562.1-201ENST00000417586 456 ntBASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AC027307.2-201ENST00000591252 911 ntBASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AC105339.1-204ENST00000636249 355 ntBASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
RAB42Q8N4Z0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB42Q8N4Z0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.96■□□□□ 0.14
RAB42Q8N4Z0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
RAB42Q8N4Z0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RAB42Q8N4Z0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 UXT-AS1-201ENST00000590504 1525 ntBASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 AC005622.1-201ENST00000636801 1703 ntBASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 AC005237.2-201ENST00000434368 219 ntBASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB42Q8N4Z0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 AC092171.3-201ENST00000610122 2651 ntBASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB42Q8N4Z0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms