Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SIX5Q8N196 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.77■□□□□ 0.27
SIX5Q8N196 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIX5Q8N196 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIX5Q8N196 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIX5Q8N196 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.76■□□□□ 0.27
SIX5Q8N196 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 AC133963.1-201ENST00000504166 1679 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 AC135050.7-201ENST00000624508 2218 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.76■□□□□ 0.27
SIX5Q8N196 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 AC098850.1-201ENST00000419919 790 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 SDHAP3-202ENST00000515467 728 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.76■□□□□ 0.27
SIX5Q8N196 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.76■□□□□ 0.27
SIX5Q8N196 RN7SL219P-201ENST00000582872 296 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.76■□□□□ 0.27
SIX5Q8N196 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.76■□□□□ 0.27
SIX5Q8N196 AL033527.5-202ENST00000641632 1098 ntBASIC16.76■□□□□ 0.27
SIX5Q8N196 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SIX5Q8N196 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.76■□□□□ 0.27
SIX5Q8N196 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SIX5Q8N196 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SIX5Q8N196 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SIX5Q8N196 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 AL589987.1-201ENST00000453380 819 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.75■□□□□ 0.27
SIX5Q8N196 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC104989.1-201ENST00000519711 778 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.75■□□□□ 0.27
SIX5Q8N196 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC008735.3-201ENST00000596646 500 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 AC093726.1-201ENST00000608064 963 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SIX5Q8N196 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.75■□□□□ 0.27
SIX5Q8N196 FRMD8P1-201ENST00000440433 1524 ntBASIC16.75■□□□□ 0.27
SIX5Q8N196 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SIX5Q8N196 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SIX5Q8N196 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms