Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AC105129.2-201ENST00000559536 390 ntBASIC22.27■■□□□ 1.16
XRN1Q8IZH2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AL008638.5-201ENST00000623814 1298 ntBASIC22.27■■□□□ 1.16
XRN1Q8IZH2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 AC007613.1-201ENST00000572811 2597 ntBASIC22.27■■□□□ 1.15
XRN1Q8IZH2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
XRN1Q8IZH2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.27■■□□□ 1.15
XRN1Q8IZH2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
XRN1Q8IZH2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 AC015910.1-201ENST00000579400 975 ntBASIC22.26■■□□□ 1.15
XRN1Q8IZH2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 AL121723.1-201ENST00000445194 1519 ntBASIC22.26■■□□□ 1.15
XRN1Q8IZH2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 ACTG1P17-201ENST00000558391 1119 ntBASIC22.26■■□□□ 1.15
XRN1Q8IZH2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC22.26■■□□□ 1.15
XRN1Q8IZH2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC22.25■■□□□ 1.15
XRN1Q8IZH2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 AC106872.11-201ENST00000605838 421 ntBASIC22.24■■□□□ 1.15
XRN1Q8IZH2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
XRN1Q8IZH2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC026410.3-201ENST00000514280 936 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms