Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 RNU1-129P-201ENST00000384064 167 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 IGLL3P-201ENST00000412472 434 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AC009078.2-202ENST00000463353 338 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 U1.21-201ENST00000580816 167 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AL031055.1-201ENST00000606362 631 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AL365203.3-201ENST00000609742 2057 ntBASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 AL139384.1-201ENST00000612143 3047 ntBASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00346Q8IVM7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 IGHV3-22-201ENST00000520721 359 ntBASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 AL031432.2-201ENST00000566714 459 ntBASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 AL928711.1-201ENST00000570165 459 ntBASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 AC010507.1-201ENST00000633895 436 ntBASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 AC005622.1-201ENST00000636801 1703 ntBASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00346Q8IVM7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms