Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CROCCP3Q8IVE0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC111152.3-201ENST00000569699 673 ntBASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC109462.3-201ENST00000573934 613 ntBASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC019129.2-201ENST00000609837 1235 ntBASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC026471.5-201ENST00000615068 467 ntBASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AL359736.2-201ENST00000621992 437 ntBASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.91□□□□□ -0.02
CROCCP3Q8IVE0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 TSPY14P-201ENST00000303979 915 ntBASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 AC012618.2-201ENST00000428058 849 ntBASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 FITM1-202ENST00000559294 800 ntBASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.9□□□□□ -0.02
CROCCP3Q8IVE0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms