Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HPS6Q86YV9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 AP006288.1-201ENST00000446065 395 ntBASIC16.26■□□□□ 0.19
HPS6Q86YV9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HPS6Q86YV9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.26■□□□□ 0.19
HPS6Q86YV9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 MCCD1P2-201ENST00000423228 335 ntBASIC16.25■□□□□ 0.19
HPS6Q86YV9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 AL139424.1-201ENST00000607572 797 ntBASIC16.25■□□□□ 0.19
HPS6Q86YV9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 AC002310.6-201ENST00000624451 1377 ntBASIC16.25■□□□□ 0.19
HPS6Q86YV9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HPS6Q86YV9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS6Q86YV9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 AL135999.2-201ENST00000622438 1686 ntBASIC16.24■□□□□ 0.19
HPS6Q86YV9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.24■□□□□ 0.19
HPS6Q86YV9 TUBB7P-202ENST00000428444 1305 ntBASIC16.24■□□□□ 0.19
HPS6Q86YV9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.24■□□□□ 0.19
HPS6Q86YV9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS6Q86YV9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.24■□□□□ 0.19
HPS6Q86YV9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS6Q86YV9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms