Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 MIR3909-201ENST00000579518 119 ntBASIC15.19■□□□□ 0.02
VRK2Q86Y07 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 Z83851.2-201ENST00000609564 659 ntBASIC15.19■□□□□ 0.02
VRK2Q86Y07 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 AL592424.1-201ENST00000563624 1536 ntBASIC15.18■□□□□ 0.02
VRK2Q86Y07 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 RHOQP3-201ENST00000437982 621 ntBASIC15.18■□□□□ 0.02
VRK2Q86Y07 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.18■□□□□ 0.02
VRK2Q86Y07 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VRK2Q86Y07 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.18■□□□□ 0.02
VRK2Q86Y07 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms