Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 AC068587.3-201ENST00000526613 355 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 BX323043.1-201ENST00000641006 1765 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 AL442647.2-201ENST00000429864 857 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 KRT43P-201ENST00000434019 910 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 AC138627.1-207ENST00000641560 1006 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ENPP7P5-201ENST00000541031 1031 ntBASIC13.41□□□□□ -0.26
VPS13CQ709C8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13CQ709C8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS13CQ709C8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 U82695.1-201ENST00000635752 1889 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 CYP4F24P-201ENST00000586049 1580 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 RARRES2P5-201ENST00000564013 466 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 AC005695.3-201ENST00000614522 232 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13CQ709C8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13CQ709C8 CU634019.7-201ENST00000624153 1185 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 FP236241.2-201ENST00000624906 1185 ntBASIC13.4□□□□□ -0.26
VPS13CQ709C8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms