Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 BANF1P1-201ENST00000553684 263 ntBASIC19.43■□□□□ 0.7
CTR9Q6PD62 AC061975.2-201ENST00000581722 295 ntBASIC19.43■□□□□ 0.7
CTR9Q6PD62 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.43■□□□□ 0.7
CTR9Q6PD62 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTR9Q6PD62 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 AC092580.3-201ENST00000430932 139 ntBASIC19.42■□□□□ 0.7
CTR9Q6PD62 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 AC097493.3-201ENST00000509725 367 ntBASIC19.42■□□□□ 0.7
CTR9Q6PD62 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 AC008894.3-201ENST00000624324 3103 ntBASIC19.42■□□□□ 0.7
CTR9Q6PD62 AC018695.7-201ENST00000624587 2492 ntBASIC19.42■□□□□ 0.7
CTR9Q6PD62 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.42■□□□□ 0.7
CTR9Q6PD62 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTR9Q6PD62 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 AC069120.2-201ENST00000524091 540 ntBASIC19.41■□□□□ 0.7
CTR9Q6PD62 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTR9Q6PD62 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.41■□□□□ 0.7
CTR9Q6PD62 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms