Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASC4Q6P4E1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AL162727.3-201ENST00000635661 2787 ntBASIC16.79■□□□□ 0.28
CASC4Q6P4E1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 KRT18P67-201ENST00000432816 1264 ntBASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AC012640.2-201ENST00000561606 901 ntBASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 REXO1L8P-201ENST00000604378 1897 ntBASIC16.79■□□□□ 0.28
CASC4Q6P4E1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 AC012569.1-201ENST00000591191 1524 ntBASIC16.79■□□□□ 0.28
CASC4Q6P4E1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASC4Q6P4E1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 AC018712.1-201ENST00000455767 687 ntBASIC16.78■□□□□ 0.28
CASC4Q6P4E1 AC108073.2-201ENST00000464002 357 ntBASIC16.78■□□□□ 0.28
CASC4Q6P4E1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 AC004790.2-201ENST00000623588 572 ntBASIC16.78■□□□□ 0.28
CASC4Q6P4E1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASC4Q6P4E1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASC4Q6P4E1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms