Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC190387.1-201ENST00000551683 408 ntBASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 AC140878.1-201ENST00000565277 250 ntBASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC144BQ3MJ40 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 SLC22A20-204ENST00000530038 1673 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 AC236430.1-201ENST00000402231 743 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 TREML5P-201ENST00000421694 576 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 SLC25A39P2-201ENST00000537614 270 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 HLA-A-202ENST00000376806 1854 ntBASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC144BQ3MJ40 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 ALOX12P2-203ENST00000570921 1945 ntBASIC19.02■□□□□ 0.63
CCDC144BQ3MJ40 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AL513477.1-201ENST00000602865 2407 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 RNU1-129P-201ENST00000384064 167 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SPDYE7P-202ENST00000420373 878 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AC002472.2-201ENST00000442739 958 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 TSPY16P-201ENST00000449843 468 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 UGT1A2P-201ENST00000454886 866 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 U1.21-201ENST00000580816 167 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 RN7SL204P-201ENST00000582831 262 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC144BQ3MJ40 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms