Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.7■□□□□ 0.74
RFX7Q2KHR2 LINC02560-201ENST00000596379 459 ntBASIC19.7■□□□□ 0.74
RFX7Q2KHR2 SPTSSB-204ENST00000617024 1292 ntBASIC19.7■□□□□ 0.74
RFX7Q2KHR2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 AC009477.1-201ENST00000452936 217 ntBASIC19.69■□□□□ 0.74
RFX7Q2KHR2 SERBP1P5-201ENST00000510079 1181 ntBASIC19.69■□□□□ 0.74
RFX7Q2KHR2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 AL590560.3-201ENST00000623350 461 ntBASIC19.69■□□□□ 0.74
RFX7Q2KHR2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX7Q2KHR2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 AL391005.1-201ENST00000623953 2435 ntBASIC19.68■□□□□ 0.74
RFX7Q2KHR2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 AC190387.1-201ENST00000551683 408 ntBASIC19.68■□□□□ 0.74
RFX7Q2KHR2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX7Q2KHR2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AL080243.2-201ENST00000418783 582 ntBASIC19.67■□□□□ 0.74
RFX7Q2KHR2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX7Q2KHR2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms