Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDH1Q08174 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH1Q08174 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDH1Q08174 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH1Q08174 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDH1Q08174 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PCDH1Q08174 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH1Q08174 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH1Q08174 AC002056.1-201ENST00000395613 760 ntBASIC15.83■□□□□ 0.12
PCDH1Q08174 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDH1Q08174 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 KRT18P3-201ENST00000451602 1288 ntBASIC15.83■□□□□ 0.12
PCDH1Q08174 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH1Q08174 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH1Q08174 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDH1Q08174 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDH1Q08174 AC140113.2-201ENST00000604370 208 ntBASIC15.83■□□□□ 0.12
PCDH1Q08174 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH1Q08174 AL365203.3-201ENST00000609742 2057 ntBASIC15.83■□□□□ 0.12
PCDH1Q08174 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 AL603832.2-201ENST00000566195 2125 ntBASIC15.83■□□□□ 0.12
PCDH1Q08174 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH1Q08174 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH1Q08174 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH1Q08174 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.82■□□□□ 0.12
PCDH1Q08174 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH1Q08174 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 AC120114.3-201ENST00000611923 658 ntBASIC15.82■□□□□ 0.12
PCDH1Q08174 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH1Q08174 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH1Q08174 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 AC016027.1-202ENST00000607927 1699 ntBASIC15.82■□□□□ 0.12
PCDH1Q08174 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH1Q08174 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
PCDH1Q08174 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDH1Q08174 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH1Q08174 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH1Q08174 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms