Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.45□□□□□ -0.1
SEC61A1P61619 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 AC006504.4-201ENST00000592118 1568 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 AC006557.2-201ENST00000592985 1240 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SEC61A1P61619 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SEC61A1P61619 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 ZNF259P1-201ENST00000407656 1365 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.45□□□□□ -0.1
SEC61A1P61619 NORAD-201ENST00000565493 5339 ntBASIC14.45□□□□□ -0.1
SEC61A1P61619 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SEC61A1P61619 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC61A1P61619 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 AC034105.1-201ENST00000563488 319 ntBASIC14.44□□□□□ -0.1
SEC61A1P61619 AC145285.3-201ENST00000564603 959 ntBASIC14.44□□□□□ -0.1
SEC61A1P61619 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 Z83851.2-201ENST00000609564 659 ntBASIC14.44□□□□□ -0.1
SEC61A1P61619 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
SEC61A1P61619 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC61A1P61619 MIR1199-201ENST00000621445 119 ntBASIC14.44□□□□□ -0.1
SEC61A1P61619 AC004706.3-202ENST00000621574 984 ntBASIC14.44□□□□□ -0.1
SEC61A1P61619 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.44□□□□□ -0.1
SEC61A1P61619 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.44□□□□□ -0.1
SEC61A1P61619 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEC61A1P61619 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SEC61A1P61619 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SEC61A1P61619 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC61A1P61619 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SEC61A1P61619 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 AC136632.2-201ENST00000512891 861 ntBASIC14.43□□□□□ -0.1
SEC61A1P61619 KRT18P58-201ENST00000527480 1120 ntBASIC14.43□□□□□ -0.1
SEC61A1P61619 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.43□□□□□ -0.1
SEC61A1P61619 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.43□□□□□ -0.1
SEC61A1P61619 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEC61A1P61619 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms