Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.18■□□□□ 0.18
SRP54P61011 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.18■□□□□ 0.18
SRP54P61011 MIR4745-201ENST00000577608 62 ntBASIC16.18■□□□□ 0.18
SRP54P61011 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 AC007967.4-201ENST00000614700 386 ntBASIC16.18■□□□□ 0.18
SRP54P61011 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 AL031731.1-201ENST00000642131 2094 ntBASIC16.18■□□□□ 0.18
SRP54P61011 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRP54P61011 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRP54P61011 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 GPAA1P2-202ENST00000606848 1787 ntBASIC16.18■□□□□ 0.18
SRP54P61011 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.18■□□□□ 0.18
SRP54P61011 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 AC005915.1-201ENST00000624912 2018 ntBASIC16.18■□□□□ 0.18
SRP54P61011 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.17■□□□□ 0.18
SRP54P61011 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.17■□□□□ 0.18
SRP54P61011 AL512638.1-201ENST00000457493 794 ntBASIC16.17■□□□□ 0.18
SRP54P61011 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 RNA5SP410-201ENST00000516285 106 ntBASIC16.17■□□□□ 0.18
SRP54P61011 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.17■□□□□ 0.18
SRP54P61011 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.17■□□□□ 0.18
SRP54P61011 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SRP54P61011 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
SRP54P61011 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SRP54P61011 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP54P61011 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.16■□□□□ 0.18
SRP54P61011 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SRP54P61011 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.16■□□□□ 0.18
SRP54P61011 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SRP54P61011 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP54P61011 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP54P61011 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP54P61011 AL353705.2-201ENST00000428243 662 ntBASIC16.16■□□□□ 0.18
SRP54P61011 AC092580.3-201ENST00000430932 139 ntBASIC16.16■□□□□ 0.18
SRP54P61011 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP54P61011 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.16■□□□□ 0.18
SRP54P61011 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.16■□□□□ 0.18
SRP54P61011 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.16■□□□□ 0.18
SRP54P61011 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SRP54P61011 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
SRP54P61011 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP54P61011 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms