Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 AL031055.1-201ENST00000606362 631 ntBASIC18.77■□□□□ 0.6
CHMP4BP1P59074 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.77■□□□□ 0.59
CHMP4BP1P59074 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 AC026691.1-201ENST00000602502 2017 ntBASIC18.76■□□□□ 0.59
CHMP4BP1P59074 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.76■□□□□ 0.59
CHMP4BP1P59074 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 AP001059.3-201ENST00000619053 235 ntBASIC18.76■□□□□ 0.59
CHMP4BP1P59074 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHMP4BP1P59074 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 WASH6P-202ENST00000359512 1437 ntBASIC18.75■□□□□ 0.59
CHMP4BP1P59074 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AC051619.7-201ENST00000568314 623 ntBASIC18.75■□□□□ 0.59
CHMP4BP1P59074 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AC239800.4-201ENST00000603712 296 ntBASIC18.75■□□□□ 0.59
CHMP4BP1P59074 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AJ011932.1-201ENST00000621707 465 ntBASIC18.75■□□□□ 0.59
CHMP4BP1P59074 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms