Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 AL645608.8-201ENST00000606034 2086 ntBASIC15.68■□□□□ 0.1
CLDN6P56747 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.68■□□□□ 0.1
CLDN6P56747 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.68■□□□□ 0.1
CLDN6P56747 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.68■□□□□ 0.1
CLDN6P56747 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN6P56747 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN6P56747 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN6P56747 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN6P56747 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CLDN6P56747 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN6P56747 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 ANKRD19P-201ENST00000338192 862 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 FAM86MP-201ENST00000340703 885 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 BNIP3P42-201ENST00000454982 569 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLDN6P56747 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN6P56747 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.67■□□□□ 0.1
CLDN6P56747 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CLDN6P56747 BNIP3P29-201ENST00000598302 571 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 AC011447.5-201ENST00000616168 564 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 AL033527.5-202ENST00000641632 1098 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 AC006277.1-201ENST00000624348 1610 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 PP12613-201ENST00000424958 2230 ntBASIC15.67■□□□□ 0.1
CLDN6P56747 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN6P56747 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN6P56747 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN6P56747 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN6P56747 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDN6P56747 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms