Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 U82695.1-201ENST00000635752 1889 ntBASIC14.35□□□□□ -0.11
FOXG1P55316 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FOXG1P55316 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
FOXG1P55316 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.35□□□□□ -0.11
FOXG1P55316 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FOXG1P55316 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FOXG1P55316 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FOXG1P55316 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FOXG1P55316 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 AL118508.1-201ENST00000613502 2345 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 HLA-H-201ENST00000383620 1096 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 POU5F1P6-201ENST00000466990 990 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.34□□□□□ -0.11
FOXG1P55316 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.34□□□□□ -0.11
FOXG1P55316 AC003101.2-201ENST00000612557 442 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXG1P55316 AC093512.1-201ENST00000617969 520 ntBASIC14.34□□□□□ -0.11
FOXG1P55316 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXG1P55316 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
FOXG1P55316 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXG1P55316 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXG1P55316 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXG1P55316 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXG1P55316 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
FOXG1P55316 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXG1P55316 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FOXG1P55316 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXG1P55316 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
FOXG1P55316 LINC02199-201ENST00000506655 2702 ntBASIC14.33□□□□□ -0.12
FOXG1P55316 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXG1P55316 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
FOXG1P55316 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXG1P55316 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FOXG1P55316 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FOXG1P55316 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FOXG1P55316 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXG1P55316 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXG1P55316 DUX4L27-201ENST00000554796 1261 ntBASIC14.33□□□□□ -0.12
FOXG1P55316 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 AC018529.1-201ENST00000613063 361 ntBASIC14.33□□□□□ -0.12
FOXG1P55316 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FOXG1P55316 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXG1P55316 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
FOXG1P55316 TUBB3P1-201ENST00000405796 1332 ntBASIC14.33□□□□□ -0.12
FOXG1P55316 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FOXG1P55316 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXG1P55316 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXG1P55316 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXG1P55316 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FOXG1P55316 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FOXG1P55316 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms