Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGCS2P54868 AL512343.1-201ENST00000605837 169 ntBASIC18.77■□□□□ 0.6
HMGCS2P54868 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.77■□□□□ 0.6
HMGCS2P54868 MIR8072-201ENST00000614241 80 ntBASIC18.77■□□□□ 0.6
HMGCS2P54868 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCS2P54868 MIR6799-201ENST00000620297 69 ntBASIC18.77■□□□□ 0.6
HMGCS2P54868 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS2P54868 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HMGCS2P54868 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCS2P54868 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCS2P54868 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.77■□□□□ 0.59
HMGCS2P54868 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.77■□□□□ 0.59
HMGCS2P54868 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.77■□□□□ 0.59
HMGCS2P54868 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS2P54868 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS2P54868 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS2P54868 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HMGCS2P54868 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.76■□□□□ 0.59
HMGCS2P54868 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.76■□□□□ 0.59
HMGCS2P54868 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.76■□□□□ 0.59
HMGCS2P54868 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS2P54868 AL365330.1-201ENST00000607459 531 ntBASIC18.76■□□□□ 0.59
HMGCS2P54868 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HMGCS2P54868 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS2P54868 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 CDC14C-201ENST00000428251 1719 ntBASIC18.76■□□□□ 0.59
HMGCS2P54868 LINC01144-201ENST00000626198 1710 ntBASIC18.76■□□□□ 0.59
HMGCS2P54868 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS2P54868 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 GGT3P-204ENST00000453783 1664 ntBASIC18.76■□□□□ 0.59
HMGCS2P54868 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS2P54868 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HMGCS2P54868 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 FO393414.2-201ENST00000405153 598 ntBASIC18.75■□□□□ 0.59
HMGCS2P54868 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.75■□□□□ 0.59
HMGCS2P54868 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.75■□□□□ 0.59
HMGCS2P54868 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.75■□□□□ 0.59
HMGCS2P54868 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.75■□□□□ 0.59
HMGCS2P54868 RRP7BP-205ENST00000566851 833 ntBASIC18.75■□□□□ 0.59
HMGCS2P54868 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.75■□□□□ 0.59
HMGCS2P54868 TMEM261P1-201ENST00000604899 340 ntBASIC18.75■□□□□ 0.59
HMGCS2P54868 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 CLK3P2-201ENST00000427566 1453 ntBASIC18.75■□□□□ 0.59
HMGCS2P54868 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS2P54868 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
HMGCS2P54868 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS2P54868 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS2P54868 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.74■□□□□ 0.59
HMGCS2P54868 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HMGCS2P54868 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 AC007389.4-201ENST00000454674 793 ntBASIC18.74■□□□□ 0.59
HMGCS2P54868 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS2P54868 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms