Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.15■□□□□ 0.34
CLCN4P51793 AC099568.2-201ENST00000609194 695 ntBASIC17.15■□□□□ 0.34
CLCN4P51793 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CLCN4P51793 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.15■□□□□ 0.34
CLCN4P51793 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLCN4P51793 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN4P51793 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCN4P51793 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCN4P51793 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCN4P51793 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN4P51793 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCN4P51793 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLCN4P51793 GGT4P-201ENST00000623672 1708 ntBASIC17.14■□□□□ 0.33
CLCN4P51793 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLCN4P51793 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 MYCLP2-201ENST00000449268 967 ntBASIC17.14■□□□□ 0.33
CLCN4P51793 AL589987.1-201ENST00000453380 819 ntBASIC17.14■□□□□ 0.33
CLCN4P51793 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCN4P51793 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN4P51793 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CLCN4P51793 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCN4P51793 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCN4P51793 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CLCN4P51793 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN4P51793 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CLCN4P51793 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN4P51793 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 AC112492.5-201ENST00000421897 457 ntBASIC17.13■□□□□ 0.33
CLCN4P51793 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 RN7SL837P-201ENST00000463010 287 ntBASIC17.13■□□□□ 0.33
CLCN4P51793 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN4P51793 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN4P51793 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN4P51793 PKD1P1-201ENST00000458669 6805 ntBASIC17.13■□□□□ 0.33
CLCN4P51793 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN4P51793 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLCN4P51793 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms