Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LHX2P50458 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LHX2P50458 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 FAM8A3P-201ENST00000427218 844 ntBASIC14.58□□□□□ -0.08
LHX2P50458 AC241585.1-201ENST00000433527 519 ntBASIC14.58□□□□□ -0.08
LHX2P50458 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LHX2P50458 INGX-202ENST00000489074 768 ntBASIC14.58□□□□□ -0.08
LHX2P50458 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.58□□□□□ -0.08
LHX2P50458 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.58□□□□□ -0.08
LHX2P50458 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.58□□□□□ -0.08
LHX2P50458 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.58□□□□□ -0.08
LHX2P50458 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.58□□□□□ -0.08
LHX2P50458 AC026979.3-201ENST00000607315 403 ntBASIC14.58□□□□□ -0.08
LHX2P50458 AL589739.1-201ENST00000607720 493 ntBASIC14.58□□□□□ -0.08
LHX2P50458 AJ011932.1-201ENST00000621707 465 ntBASIC14.58□□□□□ -0.08
LHX2P50458 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 REXO1L8P-201ENST00000604378 1897 ntBASIC14.58□□□□□ -0.08
LHX2P50458 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LHX2P50458 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.58□□□□□ -0.08
LHX2P50458 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LHX2P50458 AC100757.3-201ENST00000622361 1406 ntBASIC14.58□□□□□ -0.08
LHX2P50458 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LHX2P50458 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.57□□□□□ -0.08
LHX2P50458 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.57□□□□□ -0.08
LHX2P50458 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.57□□□□□ -0.08
LHX2P50458 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LHX2P50458 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.57□□□□□ -0.08
LHX2P50458 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.57□□□□□ -0.08
LHX2P50458 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.57□□□□□ -0.08
LHX2P50458 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.57□□□□□ -0.08
LHX2P50458 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.57□□□□□ -0.08
LHX2P50458 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LHX2P50458 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LHX2P50458 AL590560.3-201ENST00000623350 461 ntBASIC14.57□□□□□ -0.08
LHX2P50458 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LHX2P50458 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.57□□□□□ -0.08
LHX2P50458 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LHX2P50458 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LHX2P50458 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.56□□□□□ -0.08
LHX2P50458 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.56□□□□□ -0.08
LHX2P50458 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.56□□□□□ -0.08
LHX2P50458 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.56□□□□□ -0.08
LHX2P50458 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.56□□□□□ -0.08
LHX2P50458 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LHX2P50458 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms