Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HTR3AP46098 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HTR3AP46098 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HTR3AP46098 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.2■□□□□ 0.02
HTR3AP46098 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.2■□□□□ 0.02
HTR3AP46098 ACTL9-202ENST00000612068 1252 ntBASIC15.2■□□□□ 0.02
HTR3AP46098 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.2■□□□□ 0.02
HTR3AP46098 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HTR3AP46098 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR3AP46098 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR3AP46098 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 FAM45BP-202ENST00000592932 1624 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 AC026396.1-201ENST00000419388 421 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 HCG4B-203ENST00000450128 991 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.19■□□□□ 0.02
HTR3AP46098 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR3AP46098 AC096734.2-201ENST00000562054 433 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 AL031432.2-201ENST00000566714 459 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 AL928711.1-201ENST00000570165 459 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR3AP46098 AL121894.2-201ENST00000602977 491 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR3AP46098 BX640515.1-201ENST00000617215 977 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 AC007064.4-201ENST00000637740 555 ntBASIC15.19■□□□□ 0.02
HTR3AP46098 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR3AP46098 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HTR3AP46098 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR3AP46098 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR3AP46098 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR3AP46098 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR3AP46098 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR3AP46098 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR3AP46098 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR3AP46098 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.18■□□□□ 0.02
HTR3AP46098 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HTR3AP46098 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.18■□□□□ 0.02
HTR3AP46098 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR3AP46098 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
HTR3AP46098 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR3AP46098 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 AL590627.1-203ENST00000421194 1026 ntBASIC15.18■□□□□ 0.02
HTR3AP46098 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 AL513480.1-201ENST00000451731 511 ntBASIC15.18■□□□□ 0.02
HTR3AP46098 RPL13AP23-201ENST00000480739 586 ntBASIC15.18■□□□□ 0.02
HTR3AP46098 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.18■□□□□ 0.02
HTR3AP46098 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR3AP46098 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms