Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.66■□□□□ 0.58
COPB2P35606 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COPB2P35606 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.66■□□□□ 0.58
COPB2P35606 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
COPB2P35606 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 OR8S1-201ENST00000310194 1080 ntBASIC18.66■□□□□ 0.58
COPB2P35606 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 DOC2GP-202ENST00000514950 1163 ntBASIC18.66■□□□□ 0.58
COPB2P35606 MIR6069-201ENST00000620069 79 ntBASIC18.66■□□□□ 0.58
COPB2P35606 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
COPB2P35606 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 AC124067.4-201ENST00000519691 2379 ntBASIC18.66■□□□□ 0.58
COPB2P35606 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.66■□□□□ 0.58
COPB2P35606 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.65■□□□□ 0.58
COPB2P35606 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.65■□□□□ 0.58
COPB2P35606 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COPB2P35606 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COPB2P35606 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.65■□□□□ 0.58
COPB2P35606 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 MEP1AP4-201ENST00000423244 1087 ntBASIC18.65■□□□□ 0.58
COPB2P35606 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
COPB2P35606 AL365330.1-201ENST00000607459 531 ntBASIC18.65■□□□□ 0.58
COPB2P35606 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 GGT4P-201ENST00000623672 1708 ntBASIC18.65■□□□□ 0.58
COPB2P35606 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.65■□□□□ 0.58
COPB2P35606 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COPB2P35606 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPB2P35606 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.65■□□□□ 0.58
COPB2P35606 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
COPB2P35606 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
COPB2P35606 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COPB2P35606 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.64■□□□□ 0.57
COPB2P35606 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COPB2P35606 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.64■□□□□ 0.57
COPB2P35606 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.64■□□□□ 0.57
COPB2P35606 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.64■□□□□ 0.57
COPB2P35606 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.64■□□□□ 0.57
COPB2P35606 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 AC044860.1-202ENST00000559481 777 ntBASIC18.64■□□□□ 0.57
COPB2P35606 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.64■□□□□ 0.57
COPB2P35606 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.64■□□□□ 0.57
COPB2P35606 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COPB2P35606 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COPB2P35606 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms