Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC8P31273 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC8P31273 USP32P1-208ENST00000506594 1164 ntBASIC17.64■□□□□ 0.41
HOXC8P31273 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC8P31273 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXC8P31273 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC8P31273 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HOXC8P31273 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC8P31273 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC8P31273 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HOXC8P31273 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC8P31273 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.63■□□□□ 0.41
HOXC8P31273 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXC8P31273 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HOXC8P31273 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 AC104596.2-201ENST00000512793 793 ntBASIC17.63■□□□□ 0.41
HOXC8P31273 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXC8P31273 MIR4259-201ENST00000584466 101 ntBASIC17.63■□□□□ 0.41
HOXC8P31273 BRI3BPP1-201ENST00000594224 787 ntBASIC17.63■□□□□ 0.41
HOXC8P31273 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.63■□□□□ 0.41
HOXC8P31273 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXC8P31273 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXC8P31273 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXC8P31273 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXC8P31273 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HOXC8P31273 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXC8P31273 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HOXC8P31273 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC8P31273 ME2P1-201ENST00000426028 1970 ntBASIC17.62■□□□□ 0.41
HOXC8P31273 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HOXC8P31273 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 MIR658-201ENST00000385210 100 ntBASIC17.62■□□□□ 0.41
HOXC8P31273 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC8P31273 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC8P31273 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC8P31273 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC8P31273 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC8P31273 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.62■□□□□ 0.41
HOXC8P31273 AC036164.1-201ENST00000570544 333 ntBASIC17.62■□□□□ 0.41
HOXC8P31273 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC8P31273 AC010319.3-201ENST00000597028 470 ntBASIC17.62■□□□□ 0.41
HOXC8P31273 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC8P31273 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HOXC8P31273 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC8P31273 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC8P31273 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC8P31273 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HOXC8P31273 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms