Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 AC099336.1-201ENST00000417053 1171 ntBASIC16.04■□□□□ 0.16
SDHBP21912 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHBP21912 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 SLC25A47P1-201ENST00000531577 414 ntBASIC16.04■□□□□ 0.16
SDHBP21912 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SDHBP21912 AC079316.1-201ENST00000548397 411 ntBASIC16.04■□□□□ 0.16
SDHBP21912 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.04■□□□□ 0.16
SDHBP21912 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHBP21912 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHBP21912 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.04■□□□□ 0.16
SDHBP21912 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 AC012317.2-201ENST00000623305 2251 ntBASIC16.03■□□□□ 0.16
SDHBP21912 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.03■□□□□ 0.16
SDHBP21912 YBX1P6-201ENST00000442962 1002 ntBASIC16.03■□□□□ 0.16
SDHBP21912 USP32P1-208ENST00000506594 1164 ntBASIC16.03■□□□□ 0.16
SDHBP21912 RNA5SP410-201ENST00000516285 106 ntBASIC16.03■□□□□ 0.16
SDHBP21912 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHBP21912 AL512361.1-201ENST00000554200 418 ntBASIC16.03■□□□□ 0.16
SDHBP21912 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHBP21912 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.03■□□□□ 0.16
SDHBP21912 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.03■□□□□ 0.16
SDHBP21912 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.03■□□□□ 0.16
SDHBP21912 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SDHBP21912 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SDHBP21912 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.02■□□□□ 0.16
SDHBP21912 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.02■□□□□ 0.16
SDHBP21912 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.02■□□□□ 0.16
SDHBP21912 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SDHBP21912 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.02■□□□□ 0.16
SDHBP21912 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SDHBP21912 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SDHBP21912 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.02■□□□□ 0.16
SDHBP21912 CALR4P-201ENST00000431943 946 ntBASIC16.02■□□□□ 0.16
SDHBP21912 MPRIPP1-201ENST00000452433 1089 ntBASIC16.02■□□□□ 0.16
SDHBP21912 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.02■□□□□ 0.16
SDHBP21912 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.02■□□□□ 0.16
SDHBP21912 AL139327.4-201ENST00000612362 153 ntBASIC16.02■□□□□ 0.16
SDHBP21912 AC004790.1-201ENST00000612686 536 ntBASIC16.02■□□□□ 0.16
SDHBP21912 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHBP21912 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SDHBP21912 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHBP21912 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SDHBP21912 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SDHBP21912 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms