Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.86■□□□□ 0.29
ERCC2P18074 AL589702.1-201ENST00000641229 1509 ntBASIC16.86■□□□□ 0.29
ERCC2P18074 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.86■□□□□ 0.29
ERCC2P18074 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.86■□□□□ 0.29
ERCC2P18074 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 SPCS2P4-201ENST00000436160 681 ntBASIC16.86■□□□□ 0.29
ERCC2P18074 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.86■□□□□ 0.29
ERCC2P18074 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.86■□□□□ 0.29
ERCC2P18074 MIR3687-2-201ENST00000577708 61 ntBASIC16.86■□□□□ 0.29
ERCC2P18074 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 MIR3687-1-201ENST00000614492 61 ntBASIC16.86■□□□□ 0.29
ERCC2P18074 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC2P18074 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC2P18074 AL513523.2-202ENST00000427283 2040 ntBASIC16.86■□□□□ 0.29
ERCC2P18074 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC2P18074 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC2P18074 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC2P18074 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC2P18074 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC2P18074 AC105233.2-201ENST00000523697 349 ntBASIC16.85■□□□□ 0.29
ERCC2P18074 AF228730.5-201ENST00000530288 346 ntBASIC16.85■□□□□ 0.29
ERCC2P18074 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms