Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CAPN2P17655 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN2P17655 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN2P17655 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN2P17655 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 AC104794.3-201ENST00000566840 1248 ntBASIC18.93■□□□□ 0.62
CAPN2P17655 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPN2P17655 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.93■□□□□ 0.62
CAPN2P17655 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN2P17655 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN2P17655 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 AC087499.5-201ENST00000452760 1342 ntBASIC18.93■□□□□ 0.62
CAPN2P17655 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN2P17655 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN2P17655 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN2P17655 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 AL353732.1-201ENST00000569618 1459 ntBASIC18.92■□□□□ 0.62
CAPN2P17655 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CAPN2P17655 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 DFFBP1-201ENST00000433250 979 ntBASIC18.92■□□□□ 0.62
CAPN2P17655 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.92■□□□□ 0.62
CAPN2P17655 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.92■□□□□ 0.62
CAPN2P17655 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.92■□□□□ 0.62
CAPN2P17655 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 AC046185.3-201ENST00000623228 1824 ntBASIC18.92■□□□□ 0.62
CAPN2P17655 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.92■□□□□ 0.62
CAPN2P17655 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN2P17655 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CAPN2P17655 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN2P17655 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 BTBD7P1-201ENST00000447253 1453 ntBASIC18.91■□□□□ 0.62
CAPN2P17655 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 PCDHB17P-201ENST00000539533 2393 ntBASIC18.91■□□□□ 0.62
CAPN2P17655 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 AP006294.1-201ENST00000415407 339 ntBASIC18.91■□□□□ 0.62
CAPN2P17655 ACA64.2-201ENST00000459014 129 ntBASIC18.91■□□□□ 0.62
CAPN2P17655 API5-211ENST00000534695 560 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN2P17655 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN2P17655 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN2P17655 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms