Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC130P13994 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 POU5F1P6-201ENST00000466990 990 ntBASIC17.34■□□□□ 0.37
CCDC130P13994 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC130P13994 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC130P13994 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 AC106028.4-201ENST00000614509 607 ntBASIC17.34■□□□□ 0.37
CCDC130P13994 MIR6080-201ENST00000617359 66 ntBASIC17.34■□□□□ 0.37
CCDC130P13994 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC130P13994 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC130P13994 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC130P13994 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCDC130P13994 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC130P13994 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC130P13994 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC130P13994 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC130P13994 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC130P13994 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC130P13994 AC008677.1-201ENST00000519230 1561 ntBASIC17.33■□□□□ 0.37
CCDC130P13994 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CCDC130P13994 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC130P13994 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC130P13994 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC130P13994 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC130P13994 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 HLA-H-201ENST00000383620 1096 ntBASIC17.33■□□□□ 0.36
CCDC130P13994 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC130P13994 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC130P13994 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
CCDC130P13994 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC130P13994 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC130P13994 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC130P13994 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 REXO1L8P-201ENST00000604378 1897 ntBASIC17.33■□□□□ 0.36
CCDC130P13994 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC130P13994 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC130P13994 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC130P13994 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC130P13994 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC130P13994 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC130P13994 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms