Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.82□□□□□ -0.36
CD28P10747 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 AL353705.2-201ENST00000428243 662 ntBASIC12.82□□□□□ -0.36
CD28P10747 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 MTND6P24-201ENST00000440466 518 ntBASIC12.82□□□□□ -0.36
CD28P10747 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.82□□□□□ -0.36
CD28P10747 SERBP1P5-201ENST00000510079 1181 ntBASIC12.82□□□□□ -0.36
CD28P10747 RNA5SP410-201ENST00000516285 106 ntBASIC12.82□□□□□ -0.36
CD28P10747 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.82□□□□□ -0.36
CD28P10747 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.82□□□□□ -0.36
CD28P10747 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.82□□□□□ -0.36
CD28P10747 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 PCDHA12-202ENST00000613593 2588 ntBASIC12.82□□□□□ -0.36
CD28P10747 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
CD28P10747 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CD28P10747 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 SNX33P1-201ENST00000592116 1762 ntBASIC12.81□□□□□ -0.36
CD28P10747 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
CD28P10747 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CD28P10747 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 AC005034.1-201ENST00000426657 489 ntBASIC12.81□□□□□ -0.36
CD28P10747 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.81□□□□□ -0.36
CD28P10747 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CD28P10747 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CD28P10747 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD28P10747 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.81□□□□□ -0.36
CD28P10747 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 AL023806.1-201ENST00000603994 1649 ntBASIC12.8□□□□□ -0.36
CD28P10747 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 AL391256.1-201ENST00000443260 1855 ntBASIC12.8□□□□□ -0.36
CD28P10747 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD28P10747 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms