Protein–RNA interactions for Protein: P0DI80

SMIM6, Small integral membrane protein 6, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6P0DI80 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L2-201ENST00000561772 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 AL160286.2-201ENST00000567150 934 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L6-201ENST00000626483 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L1-201ENST00000627662 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L8-201ENST00000629013 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L3-201ENST00000630187 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L7-201ENST00000630678 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 DUX4L5-201ENST00000630834 1275 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 GGT3P-204ENST00000453783 1664 ntBASIC12.26□□□□□ -0.45
SMIM6P0DI80 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM6P0DI80 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM6P0DI80 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 AC134407.2-201ENST00000625089 1978 ntBASIC12.25□□□□□ -0.45
SMIM6P0DI80 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 AC020658.7-201ENST00000624274 2442 ntBASIC12.25□□□□□ -0.45
SMIM6P0DI80 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 MIR648-201ENST00000385046 94 ntBASIC12.25□□□□□ -0.45
SMIM6P0DI80 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TUBB8P6-201ENST00000436895 1288 ntBASIC12.25□□□□□ -0.45
SMIM6P0DI80 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM6P0DI80 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM6P0DI80 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms