Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AL162727.3-201ENST00000635661 2787 ntBASIC14.53□□□□□ -0.08
H2BFMP0C1H6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 KRT18P67-201ENST00000432816 1264 ntBASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AC108073.2-201ENST00000464002 357 ntBASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AC010654.1-201ENST00000615722 808 ntBASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AC004790.2-201ENST00000623588 572 ntBASIC14.53□□□□□ -0.08
H2BFMP0C1H6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2BFMP0C1H6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 AC024909.3-201ENST00000611513 2257 ntBASIC14.52□□□□□ -0.08
H2BFMP0C1H6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.52□□□□□ -0.08
H2BFMP0C1H6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.52□□□□□ -0.09
H2BFMP0C1H6 AC018712.1-201ENST00000455767 687 ntBASIC14.52□□□□□ -0.09
H2BFMP0C1H6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
H2BFMP0C1H6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2BFMP0C1H6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms