Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.99■□□□□ 0.31
CD48P09326 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CD48P09326 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD48P09326 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 U82695.1-201ENST00000635752 1889 ntBASIC16.99■□□□□ 0.31
CD48P09326 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.99■□□□□ 0.31
CD48P09326 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 CDC14C-201ENST00000428251 1719 ntBASIC16.99■□□□□ 0.31
CD48P09326 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.99■□□□□ 0.31
CD48P09326 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.98■□□□□ 0.31
CD48P09326 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.98■□□□□ 0.31
CD48P09326 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.98■□□□□ 0.31
CD48P09326 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD48P09326 AC103702.1-201ENST00000548801 2630 ntBASIC16.98■□□□□ 0.31
CD48P09326 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD48P09326 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CD48P09326 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.97■□□□□ 0.31
CD48P09326 LINC02447-202ENST00000501888 2146 ntBASIC16.97■□□□□ 0.31
CD48P09326 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 WASH6P-202ENST00000359512 1437 ntBASIC16.97■□□□□ 0.31
CD48P09326 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CD48P09326 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.97■□□□□ 0.31
CD48P09326 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CD48P09326 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CD48P09326 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 MIR574-201ENST00000385209 96 ntBASIC16.97■□□□□ 0.31
CD48P09326 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 AL022342.1-201ENST00000400363 863 ntBASIC16.97■□□□□ 0.31
CD48P09326 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.97■□□□□ 0.31
CD48P09326 POLD2P1-201ENST00000511220 997 ntBASIC16.97■□□□□ 0.31
CD48P09326 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.97■□□□□ 0.31
CD48P09326 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.97■□□□□ 0.31
CD48P09326 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 AL671883.3-201ENST00000603274 991 ntBASIC16.97■□□□□ 0.31
CD48P09326 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CD48P09326 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.97■□□□□ 0.31
CD48P09326 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD48P09326 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD48P09326 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CD48P09326 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms