Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
ERCC1P07992 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.61□□□□□ -0.07
ERCC1P07992 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.61□□□□□ -0.07
ERCC1P07992 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 DUX4L17-201ENST00000557360 1267 ntBASIC14.61□□□□□ -0.07
ERCC1P07992 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.61□□□□□ -0.07
ERCC1P07992 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ERCC1P07992 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERCC1P07992 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.61□□□□□ -0.07
ERCC1P07992 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERCC1P07992 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 YBX2P1-201ENST00000394192 760 ntBASIC14.6□□□□□ -0.07
ERCC1P07992 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.6□□□□□ -0.07
ERCC1P07992 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.6□□□□□ -0.07
ERCC1P07992 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.6□□□□□ -0.07
ERCC1P07992 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ERCC1P07992 AC010327.4-202ENST00000591484 748 ntBASIC14.6□□□□□ -0.07
ERCC1P07992 AC013467.2-201ENST00000605472 835 ntBASIC14.6□□□□□ -0.07
ERCC1P07992 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.6□□□□□ -0.07
ERCC1P07992 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.6□□□□□ -0.07
ERCC1P07992 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.6□□□□□ -0.07
ERCC1P07992 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
ERCC1P07992 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERCC1P07992 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC1P07992 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms