Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.46■□□□□ 0.55
TPM3P06753 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.46■□□□□ 0.55
TPM3P06753 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 POU5F1P6-201ENST00000466990 990 ntBASIC18.46■□□□□ 0.55
TPM3P06753 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.46■□□□□ 0.55
TPM3P06753 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.46■□□□□ 0.55
TPM3P06753 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.46■□□□□ 0.55
TPM3P06753 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TPM3P06753 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.46■□□□□ 0.55
TPM3P06753 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM3P06753 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.45■□□□□ 0.54
TPM3P06753 TOP3BP1-201ENST00000420768 1380 ntBASIC18.45■□□□□ 0.54
TPM3P06753 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.45■□□□□ 0.54
TPM3P06753 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.45■□□□□ 0.54
TPM3P06753 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.45■□□□□ 0.54
TPM3P06753 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.45■□□□□ 0.54
TPM3P06753 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.45■□□□□ 0.54
TPM3P06753 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.45■□□□□ 0.54
TPM3P06753 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TPM3P06753 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.45■□□□□ 0.54
TPM3P06753 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TPM3P06753 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.45■□□□□ 0.54
TPM3P06753 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.44■□□□□ 0.54
TPM3P06753 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TPM3P06753 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 AC104076.2-201ENST00000448912 469 ntBASIC18.44■□□□□ 0.54
TPM3P06753 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.44■□□□□ 0.54
TPM3P06753 AC010331.1-201ENST00000611423 582 ntBASIC18.44■□□□□ 0.54
TPM3P06753 AL590326.2-201ENST00000625139 305 ntBASIC18.44■□□□□ 0.54
TPM3P06753 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.44■□□□□ 0.54
TPM3P06753 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.44■□□□□ 0.54
TPM3P06753 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.44■□□□□ 0.54
TPM3P06753 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 KRT18P1-202ENST00000452408 1331 ntBASIC18.44■□□□□ 0.54
TPM3P06753 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TPM3P06753 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TPM3P06753 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
TPM3P06753 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TPM3P06753 AC069224.1-201ENST00000566372 1715 ntBASIC18.43■□□□□ 0.54
TPM3P06753 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.43■□□□□ 0.54
TPM3P06753 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms