Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
APOA4P06727 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.48■□□□□ 0.23
APOA4P06727 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
APOA4P06727 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
APOA4P06727 RNA5SP416-201ENST00000516838 111 ntBASIC16.48■□□□□ 0.23
APOA4P06727 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
APOA4P06727 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.48■□□□□ 0.23
APOA4P06727 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APOA4P06727 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.48■□□□□ 0.23
APOA4P06727 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 PCGF3-213ENST00000620529 1899 ntBASIC16.48■□□□□ 0.23
APOA4P06727 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
APOA4P06727 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
APOA4P06727 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APOA4P06727 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.47■□□□□ 0.23
APOA4P06727 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.47■□□□□ 0.23
APOA4P06727 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
APOA4P06727 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
APOA4P06727 MED15P5-201ENST00000423150 992 ntBASIC16.47■□□□□ 0.23
APOA4P06727 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 RHOQP3-201ENST00000437982 621 ntBASIC16.47■□□□□ 0.23
APOA4P06727 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.47■□□□□ 0.23
APOA4P06727 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.47■□□□□ 0.23
APOA4P06727 AL031432.2-201ENST00000566714 459 ntBASIC16.47■□□□□ 0.23
APOA4P06727 AL928711.1-201ENST00000570165 459 ntBASIC16.47■□□□□ 0.23
APOA4P06727 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
APOA4P06727 AC023141.13-201ENST00000604991 943 ntBASIC16.47■□□□□ 0.23
APOA4P06727 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.47■□□□□ 0.23
APOA4P06727 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.47■□□□□ 0.23
APOA4P06727 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
APOA4P06727 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.47■□□□□ 0.23
APOA4P06727 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APOA4P06727 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
APOA4P06727 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.46■□□□□ 0.23
APOA4P06727 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
APOA4P06727 GPAA1P2-202ENST00000606848 1787 ntBASIC16.46■□□□□ 0.23
APOA4P06727 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APOA4P06727 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APOA4P06727 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APOA4P06727 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APOA4P06727 AL022342.1-201ENST00000400363 863 ntBASIC16.46■□□□□ 0.23
APOA4P06727 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.46■□□□□ 0.23
APOA4P06727 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
APOA4P06727 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.46■□□□□ 0.23
APOA4P06727 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.46■□□□□ 0.23
APOA4P06727 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.46■□□□□ 0.23
APOA4P06727 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
APOA4P06727 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APOA4P06727 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms