Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQB2P05538 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQB2P05538 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.61■□□□□ 0.25
HLA-DQB2P05538 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC069335.1-201ENST00000489972 472 ntBASIC16.61■□□□□ 0.25
HLA-DQB2P05538 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC022145.2-201ENST00000598203 171 ntBASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC105339.1-204ENST00000636249 355 ntBASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 LINC02199-201ENST00000506655 2702 ntBASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQB2P05538 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 AP000842.3-202ENST00000569238 1080 ntBASIC16.6■□□□□ 0.25
HLA-DQB2P05538 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQB2P05538 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AL592309.1-201ENST00000443127 649 ntBASIC16.59■□□□□ 0.25
HLA-DQB2P05538 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms