Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 AC005622.1-201ENST00000636801 1703 ntBASIC13.81□□□□□ -0.2
CD74P04233 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.81□□□□□ -0.2
CD74P04233 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.81□□□□□ -0.2
CD74P04233 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CD74P04233 PMS2P1-201ENST00000431037 1228 ntBASIC13.81□□□□□ -0.2
CD74P04233 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.81□□□□□ -0.2
CD74P04233 AC096582.2-201ENST00000510860 516 ntBASIC13.81□□□□□ -0.2
CD74P04233 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.81□□□□□ -0.2
CD74P04233 AC006011.2-201ENST00000621313 1158 ntBASIC13.81□□□□□ -0.2
CD74P04233 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD74P04233 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD74P04233 NCF1C-201ENST00000438382 1427 ntBASIC13.81□□□□□ -0.2
CD74P04233 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD74P04233 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.8□□□□□ -0.2
CD74P04233 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.8□□□□□ -0.2
CD74P04233 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 ABCD1P5-201ENST00000445663 754 ntBASIC13.8□□□□□ -0.2
CD74P04233 AC087163.2-201ENST00000457299 853 ntBASIC13.8□□□□□ -0.2
CD74P04233 AL671277.2-201ENST00000458060 996 ntBASIC13.8□□□□□ -0.2
CD74P04233 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 NTF6B-201ENST00000591913 560 ntBASIC13.8□□□□□ -0.2
CD74P04233 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CD74P04233 AC114341.1-201ENST00000618070 349 ntBASIC13.8□□□□□ -0.2
CD74P04233 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD74P04233 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms