Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.5■□□□□ 0.71
COL1A1P02452 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A1P02452 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A1P02452 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A1P02452 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A1P02452 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.5■□□□□ 0.71
COL1A1P02452 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COL1A1P02452 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.5■□□□□ 0.71
COL1A1P02452 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A1P02452 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
COL1A1P02452 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 AD000864.1-201ENST00000624076 2295 ntBASIC19.49■□□□□ 0.71
COL1A1P02452 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.49■□□□□ 0.71
COL1A1P02452 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.49■□□□□ 0.71
COL1A1P02452 AC074338.1-201ENST00000416825 156 ntBASIC19.49■□□□□ 0.71
COL1A1P02452 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
COL1A1P02452 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 RPS2P32-201ENST00000439199 892 ntBASIC19.49■□□□□ 0.71
COL1A1P02452 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.49■□□□□ 0.71
COL1A1P02452 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.49■□□□□ 0.71
COL1A1P02452 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.49■□□□□ 0.71
COL1A1P02452 LINC01115-203ENST00000606068 577 ntBASIC19.49■□□□□ 0.71
COL1A1P02452 AC074044.1-201ENST00000609673 707 ntBASIC19.49■□□□□ 0.71
COL1A1P02452 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL1A1P02452 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
COL1A1P02452 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A1P02452 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 AC098850.1-201ENST00000419919 790 ntBASIC19.48■□□□□ 0.71
COL1A1P02452 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A1P02452 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.48■□□□□ 0.71
COL1A1P02452 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
COL1A1P02452 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A1P02452 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A1P02452 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL1A1P02452 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.48■□□□□ 0.71
COL1A1P02452 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A1P02452 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.48■□□□□ 0.71
COL1A1P02452 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.48■□□□□ 0.71
COL1A1P02452 AL691432.1-201ENST00000596308 1422 ntBASIC19.47■□□□□ 0.71
COL1A1P02452 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A1P02452 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
COL1A1P02452 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A1P02452 PCDHA12-202ENST00000613593 2588 ntBASIC19.47■□□□□ 0.71
COL1A1P02452 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.47■□□□□ 0.71
COL1A1P02452 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A1P02452 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A1P02452 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL1A1P02452 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A1P02452 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.47■□□□□ 0.71
COL1A1P02452 AC112492.5-201ENST00000421897 457 ntBASIC19.47■□□□□ 0.71
COL1A1P02452 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL1A1P02452 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms