Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 AC006449.6-201ENST00000612330 2296 ntBASIC15.56■□□□□ 0.08
CLPTM1O96005 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CLPTM1O96005 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CLPTM1O96005 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.56■□□□□ 0.08
CLPTM1O96005 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.56■□□□□ 0.08
CLPTM1O96005 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.56■□□□□ 0.08
CLPTM1O96005 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 SSR4P1-203ENST00000599569 2260 ntBASIC15.56■□□□□ 0.08
CLPTM1O96005 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLPTM1O96005 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLPTM1O96005 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLPTM1O96005 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLPTM1O96005 CICP14-201ENST00000629111 2732 ntBASIC15.55■□□□□ 0.08
CLPTM1O96005 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.55■□□□□ 0.08
CLPTM1O96005 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
CLPTM1O96005 TSSC2-201ENST00000450217 709 ntBASIC15.55■□□□□ 0.08
CLPTM1O96005 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.55■□□□□ 0.08
CLPTM1O96005 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.55■□□□□ 0.08
CLPTM1O96005 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.55■□□□□ 0.08
CLPTM1O96005 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.55■□□□□ 0.08
CLPTM1O96005 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.55■□□□□ 0.08
CLPTM1O96005 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLPTM1O96005 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
CLPTM1O96005 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.55■□□□□ 0.08
CLPTM1O96005 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLPTM1O96005 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLPTM1O96005 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms