Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 AC079140.1-201ENST00000508039 487 ntBASIC20.21■□□□□ 0.83
SMARCA5O60264 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.21■□□□□ 0.83
SMARCA5O60264 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 AC027307.2-201ENST00000591252 911 ntBASIC20.21■□□□□ 0.83
SMARCA5O60264 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SMARCA5O60264 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.21■□□□□ 0.83
SMARCA5O60264 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMARCA5O60264 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMARCA5O60264 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SMARCA5O60264 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCA5O60264 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 AL603832.2-201ENST00000566195 2125 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.2■□□□□ 0.82
SMARCA5O60264 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 LINC01225-203ENST00000563550 1244 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 AC005829.1-201ENST00000570002 483 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 AC026120.1-201ENST00000611536 926 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 AC055717.3-201ENST00000622967 595 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.2■□□□□ 0.82
SMARCA5O60264 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMARCA5O60264 AKAP8P1-201ENST00000434743 1349 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMARCA5O60264 AC046158.3-201ENST00000624947 2558 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SMARCA5O60264 U82695.1-201ENST00000635752 1889 ntBASIC20.2■□□□□ 0.82
SMARCA5O60264 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 AL589702.1-201ENST00000641229 1509 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
SMARCA5O60264 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 MKNK2P1-201ENST00000437526 628 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 SPDYE11-202ENST00000450699 704 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 SPDYE9P-201ENST00000570642 692 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.19■□□□□ 0.82
SMARCA5O60264 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 SPDYE10P-202ENST00000612005 668 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 SPDYE8P-202ENST00000612377 668 ntBASIC20.19■□□□□ 0.82
SMARCA5O60264 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCA5O60264 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
SMARCA5O60264 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.19■□□□□ 0.82
SMARCA5O60264 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms