Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRKNO60260 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 AC124067.4-201ENST00000519691 2379 ntBASIC15.26■□□□□ 0.03
PRKNO60260 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.26■□□□□ 0.03
PRKNO60260 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
PRKNO60260 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 AC027796.2-201ENST00000575326 344 ntBASIC15.26■□□□□ 0.03
PRKNO60260 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
PRKNO60260 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.26■□□□□ 0.03
PRKNO60260 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.26■□□□□ 0.03
PRKNO60260 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRKNO60260 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRKNO60260 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKNO60260 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.25■□□□□ 0.03
PRKNO60260 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 AL118508.1-201ENST00000613502 2345 ntBASIC15.25■□□□□ 0.03
PRKNO60260 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.25■□□□□ 0.03
PRKNO60260 SPDYE14P-201ENST00000442619 822 ntBASIC15.25■□□□□ 0.03
PRKNO60260 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.25■□□□□ 0.03
PRKNO60260 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRKNO60260 AC105233.2-201ENST00000523697 349 ntBASIC15.25■□□□□ 0.03
PRKNO60260 AF228730.5-201ENST00000530288 346 ntBASIC15.25■□□□□ 0.03
PRKNO60260 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 AC005622.1-201ENST00000636801 1703 ntBASIC15.25■□□□□ 0.03
PRKNO60260 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.25■□□□□ 0.03
PRKNO60260 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRKNO60260 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKNO60260 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKNO60260 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKNO60260 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRKNO60260 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKNO60260 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKNO60260 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRKNO60260 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKNO60260 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.24■□□□□ 0.03
PRKNO60260 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms