Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.38■□□□□ 0.21
LDB2O43679 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 ACTG1P14-201ENST00000446382 1122 ntBASIC16.37■□□□□ 0.21
LDB2O43679 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.37■□□□□ 0.21
LDB2O43679 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.37■□□□□ 0.21
LDB2O43679 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 KRT8P48-201ENST00000515599 1220 ntBASIC16.37■□□□□ 0.21
LDB2O43679 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.37■□□□□ 0.21
LDB2O43679 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 AL365203.3-201ENST00000609742 2057 ntBASIC16.37■□□□□ 0.21
LDB2O43679 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LDB2O43679 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.37■□□□□ 0.21
LDB2O43679 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LDB2O43679 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB2O43679 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB2O43679 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.36■□□□□ 0.21
LDB2O43679 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB2O43679 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LDB2O43679 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB2O43679 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.36■□□□□ 0.21
LDB2O43679 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.36■□□□□ 0.21
LDB2O43679 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.36■□□□□ 0.21
LDB2O43679 AC026120.1-201ENST00000611536 926 ntBASIC16.36■□□□□ 0.21
LDB2O43679 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.36■□□□□ 0.21
LDB2O43679 AC008267.7-201ENST00000624570 1194 ntBASIC16.36■□□□□ 0.21
LDB2O43679 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LDB2O43679 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LDB2O43679 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LDB2O43679 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 MIR648-201ENST00000385046 94 ntBASIC16.35■□□□□ 0.21
LDB2O43679 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 RN7SL589P-201ENST00000481268 310 ntBASIC16.35■□□□□ 0.21
LDB2O43679 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.35■□□□□ 0.21
LDB2O43679 AC105233.2-201ENST00000523697 349 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms