Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP2AO43633 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP2AO43633 RNA5SP410-201ENST00000516285 106 ntBASIC18.43■□□□□ 0.54
CHMP2AO43633 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.43■□□□□ 0.54
CHMP2AO43633 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP2AO43633 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.43■□□□□ 0.54
CHMP2AO43633 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2AO43633 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2AO43633 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHMP2AO43633 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 AC092364.2-201ENST00000596710 2692 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 CNN2P2-201ENST00000443536 909 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 CNN2P3-201ENST00000450201 906 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 CYMP-203ENST00000474680 1263 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 AC093512.1-201ENST00000617969 520 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 AL136317.3-201ENST00000618497 906 ntBASIC18.42■□□□□ 0.54
CHMP2AO43633 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP2AO43633 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CHMP2AO43633 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHMP2AO43633 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CHMP2AO43633 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2AO43633 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 PCDH8P1-201ENST00000428983 2773 ntBASIC18.41■□□□□ 0.54
CHMP2AO43633 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 HLA-H-201ENST00000383620 1096 ntBASIC18.41■□□□□ 0.54
CHMP2AO43633 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.41■□□□□ 0.54
CHMP2AO43633 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.41■□□□□ 0.54
CHMP2AO43633 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP2AO43633 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP2AO43633 AC098859.1-201ENST00000502915 1238 ntBASIC18.41■□□□□ 0.54
CHMP2AO43633 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.41■□□□□ 0.54
CHMP2AO43633 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP2AO43633 AC069262.1-201ENST00000539058 672 ntBASIC18.41■□□□□ 0.54
CHMP2AO43633 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2AO43633 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2AO43633 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms